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Ignazio Sammarco
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Biodiversity Journal, 9 (2): 115-120
Viviana Giangreco, Ignazio Sammarco, Tiziana Lupo, Sergio Migliore & Stefano Reale
Molecular techniques employed to trace the Sicilian ovines
https://doi.org/10.31396/Biodiv.Jour.2018.9.2.115.120ABSTRACT
Genotyping strategies are aimed at defining the genetic profile of individuals through the identification of STRs sequences. The applied methodologies are able to ensure the traceability of the meat along the production chains and the control of the correct animal sampling on the farms. However, the discriminative capacity of alleles is studied through the establishment of the allelic frequency in the ovine population of the territory. This may depend on factors such as race, degree of inbreeding, and local selections. In the research of genetic identity in particular, it is exploited that the probability that two different individuals possess the same genetic pattern is equal to the frequency of that genotype in the population under examination and that the frequency of a genotype characterized by more loci is equal to the product of the frequencies of each single genotype (locus) observed. Therefore, we set the task of fixing and tabulating the data of the genetic profiles of the autochthonous breeds that can then be exploited for the traceability investigations of the animals, according to the application of specific algorithms. In practice, we aim to establish and create the starting point for the interpretation of all the genetic data obtained from the analysis of the Sicilian ovine population, whatever the application to do with it. The ultimate goal of this work is the elaboration of allelic panels typical of the sheep populations that represent the starting point for all genetic tests of forensic investigations. In fact, the discovery of particular alleles identify the tabulated frequency representing the genetic variability distribuited in the region. This has the effect of minimizing the identification errors that are spread in the animal population. We can state that from the analysis of allele frequencies developed by Genalex we can obtain expected heterozygosity data according to Hardy-Weinberg law and the obtained heterozygosity data typical for native breeds. All the allele frequencies were employed to create a database containing all the genotypes. These data were useful in the forensic field for the attribution of the kinships in the sheep. -
Biodiversity Journal, 10 (4): 445-450 - MONOGRAPH
Viviana Giangreco, Tiziana Lupo, Ignazio Sammarco, Maurizio Bivona, Gabriele Ciaccio, Luca Sineo & Stefano Reale
Genetic database development for the characterisation of Sicilian sheep population
https://doi.org/10.31396/Biodiv.Jour.2019.10.4.445.450ABSTRACT
The most representative sheep in Sicily are Belicina, Comisana, Pinzirita, Barbaresca and the crossbred derived sheep from all this species. In this study, the allelic frequencies of the Sicilian sheep population were investigated. It currently represents the best way to determine the genetic identity and/or family even with limited amounts of sample or when the DNA is degraded. The aim of the study was to provide a reference data bank and to evaluate a microsatellite panel for pedigree analysis as suggested by the International Society for Animal Genetics (ISAG). There are various studies on European sheep, but few datasets were developed on the population of Sicilian sheep. The reference database will include allele frequencies at each locus and will determine genetic parameters for Sicilian ovine species selection. Our results indicated that Hardy Weinberg equilibrium was not always maintained. These results could be explained by a non-random mating. The database is useful to investigate the relationship, the parentage the meat traceability and in disease control programs. The standardized panels of allele frequencies represent a molecular fingerprinting characterizing the subjects with very high definition level and can be useful to control all the livestock. The parentage identification could be important for the veterinary police to investigate the theft or the animal substitutions in the Sicilian farms.
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